About Me
I'm a bioinformatician working in bioinformatics support for NGS sequencers of Life Technologies. I have a graduation in Physics and a PhD on Bioinformatics, both from USP.
This page is my humble site. Instead of using some platform or hosted solution, I just decided to go in the hard way and create an ec2 instance to host this page. Actually, you can't find much stuff in this site, only a bunch of links for my presence in the web.
Bioinformatics Lecture Notes
I have been working in lectures notes for NGS analysis, specially for Ion Torrent PGM sequencer. The PDF file is available here: apostila.pdf (sorry, only in portuguese).
Other projects
During my PhD I developed the kempbasu program for testing differencial expression in Digital Gene expression Experiments like SAGE. The software is available here: KempBasu Page. I also created the simcluster program to cluster samples based on their gene expression profiles. The software is availabe at USP and at The Institute for Systems Biology.
Publications
Int J Parasitol. 2012 Jan;42(1):39-48. doi: 10.1016/j.ijpara.2011.10.008. Epub 2011 Nov 22. PubMed PMID: 22142560.
PLoS One. 2010 Oct 8;5(10):e13205. doi: 10.1371/journal.pone.0013205. PubMed PMID: 20949028; PubMed Central PMCID: PMC2951895.
BMC Med Genomics. 2008 Nov 11;1:56. doi: 10.1186/1755-8794-1-56. PubMed PMID: 19014460; PubMed Central PMCID: PMC2629771.
BMC Bioinformatics. 2007 Jul 11;8:246. PubMed PMID: 17625017; PubMed Central PMCID: PMC2147035.
Bioinformatics. 2005 Jun 15;21(12):2812-3. Epub 2005 Apr 6. PubMed PMID: 15814554.